STRINGSTRING
Solyc06g063420.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g063420.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g063420.2.1Uncharacterized protein (943 aa)    
Predicted Functional Partners:
Solyc12g011180.1.1
Uncharacterized protein (635 aa)
     
  0.987
Solyc05g023840.1.1
Uncharacterized protein (134 aa)
     
  0.973
Solyc01g088720.2.1
Uncharacterized protein (615 aa)
     
  0.973
Solyc05g051620.2.1
Uncharacterized protein (371 aa)
       
  0.963
Solyc05g025650.2.1
Uncharacterized protein (200 aa)
       
  0.963
Solyc03g007100.2.1
Uncharacterized protein (1425 aa)
     
      0.956
Solyc03g025540.2.1
Uncharacterized protein (739 aa)
     
      0.954
Solyc07g049480.2.1
Uncharacterized protein (731 aa)
     
      0.901
Solyc01g009290.2.1
Protein CLP1 homolog ; Required for endonucleolytic cleavage during polyadenylation-dependent pre-mRNA 3’-end formation (439 aa)
       
      0.901
Solyc03g111260.2.1
Uncharacterized protein (852 aa)
     
      0.899
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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