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Solyc06g064650.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g064650.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g064650.2.1Uncharacterized protein; Hydroxysteroid dehydrogenase 5; Belongs to the short-chain dehydrogenases/reductases (SDR) family (322 aa)    
Predicted Functional Partners:
CPT3
annotation not available (165 aa)
           
  0.581
CPT4
annotation not available (308 aa)
           
  0.559
CPT5
annotation not available (122 aa)
           
  0.559
NDPS1
Dimethylallylcistransferase, chloroplastic (305 aa)
           
  0.559
CPT2
annotation not available (183 aa)
           
  0.559
CPT6
annotation not available (304 aa)
           
  0.559
Solyc00g136560.2.1
annotation not available (165 aa)
           
  0.559
CPA
N-carbamoylputrescine amidase; Involved in polyamine biosynthesis; Belongs to the carbon-nitrogen hydrolase superfamily (300 aa)
           
  0.535
101266880
Uncharacterized protein; NAD(P)-binding Rossmann-fold superfamily protein (308 aa)
     
   
  0.477
Solyc12g038400.1.1
annotation not available (655 aa)
     
   
  0.467
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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