STRINGSTRING
Solyc06g065230.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g065230.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g065230.2.1Uncharacterized protein (174 aa)    
Predicted Functional Partners:
Solyc09g057910.2.1
Uncharacterized protein (544 aa)
       
 
  0.975
Solyc09g057920.2.1
Uncharacterized protein (509 aa)
       
 
  0.974
Solyc05g009910.2.1
Uncharacterized protein (300 aa)
       
      0.951
Solyc06g066790.2.1
Uncharacterized protein (950 aa)
       
 
  0.935
NAA16
N-alpha-acetyltransferase 16, NatA auxiliary subunit (897 aa)
       
 
  0.935
Solyc07g007810.2.1
Uncharacterized protein (710 aa)
       
  0.846
Solyc08g016670.2.1
Uncharacterized protein (219 aa)
     
      0.736
Solyc12g099240.1.1
Uncharacterized protein (110 aa)
     
 
  0.726
Solyc11g067010.1.1
Uncharacterized protein (117 aa)
     
      0.693
Solyc09g009300.2.1
Uncharacterized protein (197 aa)
     
      0.693
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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