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STRINGSTRING
FUT13 protein (Solanum lycopersicum) - STRING interaction network
"FUT13" - Alpha-1,4-fucosyltransferase in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FUT13Alpha-1,4-fucosyltransferase (413 aa)    
Predicted Functional Partners:
101253606
Uncharacterized protein; Beta-1,2-xylosyltransferase (524 aa)
           
  0.847
101266287
Golgi alpha-mannosidase II (1151 aa)
           
  0.763
101267025
Galactosyltransferase family protein (654 aa)
     
   
  0.739
101249076
Uncharacterized protein; Galactosyltransferase1 (629 aa)
     
   
  0.739
101257812
Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase, putative (446 aa)
           
  0.699
101246787
alpha-1,2-Mannosidase; Alpha-mannosidase 3; Belongs to the glycosyl hydrolase 47 family (629 aa)
     
   
  0.666
Solyc02g090260.1.1
Unknown protein; Has 54 Blast hits to 54 proteins in 22 species- Archae - 0; Bacteria - 0; Metazoa - 29; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 1 (source- NCBI BLink) (566 aa)
           
  0.610
Solyc02g090250.2.1
annotation not available (101 aa)
           
  0.610
101253202
annotation not available (313 aa)
     
   
  0.579
101262322
annotation not available (565 aa)
     
   
  0.564
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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