STRINGSTRING
Solyc06g065700.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g065700.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g065700.2.1Uncharacterized protein (685 aa)    
Predicted Functional Partners:
Solyc07g006820.2.1
Uncharacterized protein (1823 aa)
     
  0.997
Solyc04g010090.2.1
Uncharacterized protein (161 aa)
     
  0.996
Solyc12g096470.1.1
Uncharacterized protein (138 aa)
     
  0.996
Solyc04g078050.2.1
Uncharacterized protein (934 aa)
     
  0.994
Solyc09g009680.2.1
Uncharacterized protein (566 aa)
     
  0.991
Solyc03g122020.2.1
Uncharacterized protein (642 aa)
     
  0.991
Solyc01g028930.2.1
Uncharacterized protein (203 aa)
     
  0.991
Solyc04g076580.2.1
Uncharacterized protein (169 aa)
     
  0.990
Solyc10g006100.2.1
Uncharacterized protein (547 aa)
     
  0.988
Solyc07g065040.2.1
Uncharacterized protein (560 aa)
     
  0.988
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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