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STRINGSTRING
101264333 protein (Solanum lycopersicum) - STRING interaction network
"101264333" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101264333annotation not available (197 aa)    
Predicted Functional Partners:
Solyc04g047720.2.1
Unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- endoplasmic reticulum, plasma membrane; EXPRESSED IN- 24 plant structures; EXPRESSED DURING- 13 growth stages; Has 149 Blast hits to 149 /.../ns in 49 species- Archae - 0; Bacteria - 0; Metazoa - 98; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 4 (source- NCBI BLink) (205 aa)
     
 
  0.942
Solyc05g054100.2.1
ER membrane protein complex subunit 3; Protein of unknown function DUF106, transmembrane (289 aa)
     
 
  0.936
101246647
Uncharacterized protein; CONTAINS InterPro DOMAIN/s- Uncharacterised conserved protein UCP017207, transmembrane protein 85 (InterPro-IPR016687), Protein of unknown function DUF1077 (InterPro-IPR009445); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bac /.../- 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink) (178 aa)
     
 
  0.934
Solyc01g058280.2.1
Rab5-interacting family protein (103 aa)
     
 
  0.931
101252322
Uncharacterized protein; Catalytics (982 aa)
     
 
  0.923
101267847
annotation not available (300 aa)
     
 
  0.910
101244326
annotation not available (204 aa)
     
 
  0.858
101268196
annotation not available (204 aa)
     
 
  0.858
101264548
Uncharacterized protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- endomembrane system; EXPRESSED IN- 24 plant structures; EXPRESSED DURING- 15 growth stages; CONTAINS InterPro DOMAIN/s- Magnesium transporter (InterPro-IP /.../7); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink) (105 aa)
     
 
  0.828
101251952
Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family (245 aa)
     
   
  0.682
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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