• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
109120519 protein (Solanum lycopersicum) - STRING interaction network
"109120519" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
109120519annotation not available (223 aa)    
Predicted Functional Partners:
Solyc10g086720.1.1
annotation not available (303 aa)
     
   
  0.907
101260852
Uncharacterized protein; High cyclic electron flow 1; Belongs to the FBPase class 1 family (403 aa)
     
   
  0.907
101248056
Uncharacterized protein; RNA binding (365 aa)
   
        0.898
Solyc08g079110.2.1
Pentapeptide repeat-containing protein (264 aa)
   
        0.890
101245121
annotation not available (228 aa)
   
        0.888
Solyc02g069450.2.1
annotation not available (246 aa)
   
        0.887
psaD
Photosystem I reaction center subunit II, chloroplastic; PsaD can form complexes with ferredoxin and ferredoxin- oxidoreductase in photosystem I (PS I) reaction center. PSAD may encode the ferredoxin-docking protein (208 aa)
   
        0.879
101254882
Uncharacterized protein; ATP synthase delta-subunit gene (250 aa)
     
        0.871
101253094
Uncharacterized protein; Chloroplast RNA binding (379 aa)
     
        0.870
101255322
Phosphoribulokinase (400 aa)
     
        0.869
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (14%) [HD]