STRINGSTRING
Solyc06g067860.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g067860.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g067860.2.1Uncharacterized protein (318 aa)    
Predicted Functional Partners:
NIA
Nitrate reductase [NADH] ; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (912 aa)
     
   
  0.489
Solyc06g060800.2.1
Uncharacterized protein (310 aa)
   
          0.472
Solyc09g089770.2.1
Uncharacterized protein (294 aa)
   
          0.466
Solyc02g071450.2.1
Uncharacterized protein (360 aa)
   
          0.465
Solyc01g105650.2.1
Uncharacterized protein (356 aa)
   
          0.460
Solyc11g044810.1.1
Uncharacterized protein (250 aa)
   
          0.455
Solyc02g071470.2.1
Uncharacterized protein (360 aa)
   
          0.455
Solyc09g089690.2.1
Uncharacterized protein (375 aa)
   
          0.454
Solyc08g080040.2.1
Uncharacterized protein (418 aa)
   
          0.454
Solyc03g095920.1.1
Uncharacterized protein (248 aa)
   
          0.450
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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