STRINGSTRING
Solyc06g067870.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g067870.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g067870.2.1Uncharacterized protein (317 aa)    
Predicted Functional Partners:
Solyc03g095920.1.1
Uncharacterized protein (248 aa)
   
          0.496
NIA
Nitrate reductase [NADH] ; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (912 aa)
     
   
  0.489
Solyc02g071450.2.1
Uncharacterized protein (360 aa)
   
          0.481
Solyc11g044810.1.1
Uncharacterized protein (250 aa)
   
          0.480
Solyc08g078330.2.1
Uncharacterized protein (304 aa)
   
          0.480
Solyc11g072120.1.1
Uncharacterized protein (257 aa)
   
          0.477
Solyc11g072110.1.1
Uncharacterized protein (357 aa)
   
          0.467
Solyc10g026520.1.1
Uncharacterized protein (342 aa)
   
          0.460
Solyc03g116290.1.1
Uncharacterized protein (319 aa)
   
          0.456
Solyc11g072130.1.1
Uncharacterized protein (228 aa)
   
          0.449
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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