STRINGSTRING
Solyc06g067900.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g067900.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g067900.1.1Uncharacterized protein (349 aa)    
Predicted Functional Partners:
Solyc01g005240.2.1
Uncharacterized protein (565 aa)
       
      0.802
Solyc11g040390.1.1
Uncharacterized protein (819 aa)
       
      0.602
Solyc06g064550.2.1
Uncharacterized protein (919 aa)
       
      0.602
Solyc01g104930.1.1
Uncharacterized protein (183 aa)
       
      0.596
Solyc01g104920.2.1
Uncharacterized protein (692 aa)
       
      0.596
CIP3
Peptidyl-prolyl cis-trans isomerase (112 aa)
       
      0.439
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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