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STRINGSTRING
Solyc06g067900.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g067900.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g067900.1.1annotation not available (349 aa)    
Predicted Functional Partners:
CIP3
Peptidyl-prolyl cis-trans isomerase (112 aa)
       
 
  0.686
101258399
annotation not available (565 aa)
       
      0.640
101244486
Uncharacterized protein; Pleiotropic drug resistance 4; Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily (1421 aa)
     
   
  0.594
100527965
Auxin efflux carrier component; May act as a component of the auxin efflux carrier (611 aa)
       
 
  0.578
101259420
annotation not available (485 aa)
       
 
  0.573
101248518
annotation not available (485 aa)
       
 
  0.573
SAHH
Adenosylhomocysteinase; Adenosylhomocysteine is a competitive inhibitor of S- adenosyl-L-methionine-dependent methyl transferase reactions; therefore adenosylhomocysteinase may play a key role in the control of methylations via regulation of the intracellular concentration of adenosylhomocysteine (485 aa)
       
 
  0.573
Solyc05g032820.1.1
Uncharacterized protein; S-adenosyl-l-homocysteine (SAH) hydrolase 2 (222 aa)
       
 
  0.573
101253075
Uncharacterized protein; ATPase E1 (167 aa)
           
  0.563
Solyc11g072590.1.1
annotation not available (1034 aa)
           
  0.551
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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