STRINGSTRING
Solyc06g068030.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g068030.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g068030.2.1Uncharacterized protein (137 aa)    
Predicted Functional Partners:
Solyc04g015050.2.1
Uncharacterized protein (194 aa)
     
  0.995
Solyc10g006490.2.1
Uncharacterized protein (186 aa)
     
  0.987
Solyc01g096530.2.1
Uncharacterized protein (186 aa)
     
  0.987
Solyc04g072410.2.1
Uncharacterized protein (175 aa)
     
  0.974
Solyc03g007680.2.1
Uncharacterized protein (175 aa)
     
  0.973
Solyc01g100840.2.1
Uncharacterized protein (141 aa)
     
  0.973
Solyc07g063450.1.1
Uncharacterized protein (915 aa)
       
  0.969
Solyc07g063440.2.1
Uncharacterized protein (1254 aa)
       
  0.969
Solyc01g006960.2.1
Uncharacterized protein (1268 aa)
       
 
  0.963
Solyc12g049420.1.1
Uncharacterized protein (218 aa)
     
  0.747
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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