• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
SNF4 protein (Solanum lycopersicum) - STRING interaction network
SNF4 in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNF4SNF4 (373 aa)    
Predicted Functional Partners:
GAL83
Uncharacterized protein; Gal83 (289 aa)
     
 
  0.878
101256847
annotation not available (239 aa)
     
   
  0.864
101265334
Protein serine/threonine phosphatases;protein kinases;catalytics;cAMP-dependent protein kinase regulators;ATP binding;protein serine/threonine phosphatases (1080 aa)
   
 
  0.847
101251603
Unknown protein; Has 42 Blast hits to 42 proteins in 10 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (101 aa)
     
        0.846
101251876
Uncharacterized protein; Cystathionine beta-synthase (CBS) family protein (420 aa)
           
  0.837
101266908
annotation not available (659 aa)
     
   
  0.831
101245800
Uncharacterized protein; Homolog of yeast sucrose nonfermenting 4 (483 aa)
     
 
  0.762
Solyc01g067590.2.1
annotation not available (482 aa)
     
 
  0.762
101252688
Unknown protein; BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT5G52420.1); Has 86 Blast hits to 86 proteins in 15 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 2 (source /.../ BLink) (264 aa)
     
   
  0.743
Solyc11g069310.1.1
annotation not available (212 aa)
     
 
  0.724
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (8%) [HD]