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STRINGSTRING
Solyc06g068960.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g068960.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g068960.1.1annotation not available (154 aa)    
Predicted Functional Partners:
Solyc02g068670.1.1
annotation not available (567 aa)
     
 
  0.811
100736479
LAX4 protein (485 aa)
           
  0.799
Solyc07g048030.2.1
annotation not available (437 aa)
     
   
  0.798
101265482
annotation not available (235 aa)
           
  0.798
101249931
annotation not available (298 aa)
           
  0.798
101264779
Uncharacterized protein; Basic helix-loop-helix (bHLH) DNA-binding superfamily protein (298 aa)
           
  0.797
IAA4
Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations (190 aa)
           
  0.797
101267960
Kinesin-like calmodulin-binding protein (ZWICHEL); Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family (1265 aa)
       
 
  0.776
101256940
annotation not available (1375 aa)
       
 
  0.743
101244201
Uncharacterized protein; Two-pore channel 1 (739 aa)
     
 
  0.739
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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