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STRINGSTRING
101244674 protein (Solanum lycopersicum) - STRING interaction network
"101244674" - Unknown protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101244674Unknown protein; INVOLVED IN- biological_process unknown; LOCATED IN- chloroplast; EXPRESSED IN- 22 plant structures; EXPRESSED DURING- 13 growth stages; Has 74 Blast hits to 74 proteins in 29 species- Archae - 0; Bacteria - 19; Metazoa - 0; Fungi - /.../ants - 49; Viruses - 0; Other Eukaryotes - 6 (source- NCBI BLink) (248 aa)    
Predicted Functional Partners:
101254513
Protein containing PDZ domain, a K-box domain, and a TPR region (330 aa)
      
        0.874
EO
2-methylene-furan-3-one reductase; Enone oxidoreductase involved in the biosynthesis of 4- hydroxy-2,5-dimethyl-3(2H)-furanone (HDMF or furaneol). Can use both NADH and NADPH as the electron donor (388 aa)
      
        0.870
SPA
Protein SPA, chloroplastic; Participates in determining harvest index (HI) by affecting source-sink carbon distribution. Up-regulates the conversion of fixed carbon to exportable sugars (159 aa)
      
        0.867
101245045
Protein of unknown function (DUF1118) (190 aa)
      
        0.867
101252980
Unknown protein; BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT4G11911.1); Has 216 Blast hits to 212 proteins in 76 species- Archae - 0; Bacteria - 96; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 2 (so /.../NCBI BLink) (242 aa)
      
        0.864
101248905
Unknown protein; FUNCTIONS IN- molecular_function unknown; LOCATED IN- chloroplast; EXPRESSED IN- 21 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- Protein of unknown function DUF2996 (InterPro-IPR021374); Has 159 /.../hits to 159 proteins in 52 species- Archae - 0; Bacteria - 76; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 45 (source- NCBI BLink) (185 aa)
      
        0.860
101268541
annotation not available (292 aa)
      
        0.857
Solyc02g070760.2.1
annotation not available (294 aa)
      
        0.857
LOC543930
Putative uncharacterized protein (238 aa)
      
        0.856
101252442
Uncharacterized protein; NAD(P)-binding Rossmann-fold superfamily protein (386 aa)
      
        0.849
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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