STRINGSTRING
Solyc06g069210.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g069210.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g069210.2.1Uncharacterized protein (684 aa)    
Predicted Functional Partners:
Solyc02g082840.2.1
Uncharacterized protein (794 aa)
       
 
  0.591
Solyc07g056010.2.1
Uncharacterized protein (736 aa)
     
  0.524
Solyc06g065740.2.1
Golgi SNAP receptor complex member 1 ; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide- sensitive factor) attachment protein receptor (221 aa)
       
  0.511
Solyc01g091150.2.1
Uncharacterized protein (102 aa)
       
  0.511
Solyc01g091020.2.1
Golgi SNAP receptor complex member 1 ; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide- sensitive factor) attachment protein receptor (235 aa)
       
  0.511
Solyc01g087650.2.1
Uncharacterized protein (576 aa)
     
 
  0.501
Solyc08g006660.1.1
Uncharacterized protein (742 aa)
     
 
  0.500
Solyc12g008390.1.1
Uncharacterized protein (722 aa)
     
   
  0.499
Solyc05g006950.2.1
Embryo yellow protein (835 aa)
         
  0.490
Solyc10g007720.2.1
Uncharacterized protein (845 aa)
     
 
    0.475
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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