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MSH2 protein (Solanum lycopersicum) - STRING interaction network
"MSH2" - Mismatch repair protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MSH2Mismatch repair protein ; Component of the post-replicative DNA mismatch repair system (MMR) (943 aa)    
Predicted Functional Partners:
Solyc09g090890.1.1
Uncharacterized protein (144 aa)
     
  0.992
Solyc07g018340.2.1
Uncharacterized protein (320 aa)
     
  0.992
Solyc00g017880.1.1
Annotation not available (1083 aa)
 
0.991
MLH1
MLH1 (728 aa)
 
  0.991
Solyc01g079520.2.1
Uncharacterized protein ; Component of the post-replicative DNA mismatch repair system (MMR) (1312 aa)
   
0.991
MSH7
Mismatch repair protein (811 aa)
   
0.990
MSH1
DNA mismatch repair protein (1137 aa)
     
0.989
Solyc07g042790.1.1
Uncharacterized protein (1452 aa)
     
  0.988
Solyc06g034070.1.1
Uncharacterized protein (1557 aa)
     
  0.988
Solyc09g074980.2.1
Uncharacterized protein (796 aa)
 
  0.984
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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