STRINGSTRING
TCP17 protein (Solanum lycopersicum) - STRING interaction network
"TCP17" - TCP transcription factor 17 in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCP17TCP transcription factor 17 (416 aa)    
Predicted Functional Partners:
TCP10
TCP transcription factor 10 (244 aa)
       
 
  0.856
TCP7
TCP transcription factor 7 (241 aa)
           
  0.700
TCP1
TCP transcription factor 1 (354 aa)
           
  0.699
SAP11
Stress-associated protein 11 (188 aa)
           
  0.695
Solyc05g052910.2.1
Uncharacterized protein (504 aa)
       
 
  0.501
Solyc03g079910.2.1
Uncharacterized protein (549 aa)
       
 
  0.501
TCP5
TCP transcription factor 5 (284 aa)
       
 
  0.480
GAI
DELLA protein GAI ; Probable transcriptional regulator that acts as a repressor of the gibberellin (GA) signaling pathway. Probably acts by participating in large multiprotein complexes that repress transcription of GA-inducible genes. Upon GA application, it is degraded by the proteasome, allowing the GA signaling pathway (By similarity). Its degradation is not essential for germination (588 aa)
       
      0.477
Solyc02g092780.1.1
Uncharacterized protein (1055 aa)
       
      0.475
TCP3
SlTCP3; TCP transcription factor 3 (394 aa)
       
 
  0.460
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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