STRINGSTRING
Solyc06g071040.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g071040.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g071040.2.1Uncharacterized protein (838 aa)    
Predicted Functional Partners:
Solyc06g060120.2.1
Uncharacterized protein (791 aa)
     
      0.632
Solyc04g082760.2.1
Uncharacterized protein (489 aa)
     
      0.632
Solyc03g097450.2.1
Uncharacterized protein (573 aa)
     
      0.632
Solyc01g109510.2.1
Uncharacterized protein (945 aa)
     
      0.632
Solyc01g057760.2.1
Uncharacterized protein (1221 aa)
     
      0.617
Solyc12g056740.1.1
Uncharacterized protein (636 aa)
       
      0.617
ER68
Ethylene-responsive RNA helicase (479 aa)
       
      0.617
Solyc12g035130.1.1
Uncharacterized protein (612 aa)
       
      0.617
Solyc12g006320.1.1
Uncharacterized protein (643 aa)
       
      0.617
Solyc11g045190.1.1
Uncharacterized protein (492 aa)
       
      0.617
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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