STRINGSTRING
Solyc06g071140.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g071140.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g071140.2.1Uncharacterized protein (520 aa)    
Predicted Functional Partners:
Solyc09g008470.2.1
Uncharacterized protein (345 aa)
       
    0.856
Solyc11g005110.1.1
Uncharacterized protein (523 aa)
     
  0.742
Solyc08g077310.2.1
Uncharacterized protein (1010 aa)
     
    0.648
Solyc02g081410.2.1
Uncharacterized protein (534 aa)
     
    0.623
Solyc05g052000.2.1
Uncharacterized protein (219 aa)
     
    0.602
Solyc03g093350.2.1
Uncharacterized protein (723 aa)
     
    0.602
Solyc01g006010.2.1
Uncharacterized protein (803 aa)
     
    0.602
Solyc06g053630.2.1
Serine/threonine-protein phosphatase (322 aa)
       
      0.595
Solyc06g030490.2.1
Serine/threonine-protein phosphatase (304 aa)
       
      0.595
Solyc05g055060.2.1
Serine/threonine-protein phosphatase (325 aa)
       
      0.595
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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