STRINGSTRING
Solyc06g071240.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g071240.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g071240.1.1Uncharacterized protein (136 aa)    
Predicted Functional Partners:
Solyc08g081150.2.1
Uncharacterized protein (536 aa)
   
   
  0.696
Solyc07g065590.2.1
Nicotinate-nucleotide adenylyltransferase (251 aa)
       
  0.688
Solyc04g056540.2.1
Uncharacterized protein (603 aa)
         
  0.683
Solyc03g044430.2.1
Uncharacterized protein (566 aa)
   
   
  0.680
Solyc02g093290.2.1
Uncharacterized protein (558 aa)
   
   
  0.680
Solyc00g026870.1.1
Annotation not available (465 aa)
         
  0.610
Solyc05g012090.2.1
Dihydropterin pyrophosphokinase-dihydropteroate synthase (512 aa)
   
   
  0.597
Solyc00g130190.1.1
Annotation not available (730 aa)
   
   
  0.570
Solyc03g062830.2.1
Uncharacterized protein (281 aa)
       
  0.550
Solyc03g043860.2.1
Uncharacterized protein (150 aa)
       
  0.550
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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