STRINGSTRING
Solyc06g071470.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g071470.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g071470.2.1Uncharacterized protein (527 aa)    
Predicted Functional Partners:
Solyc10g005650.2.1
Uncharacterized protein (744 aa)
     
  0.995
Solyc06g060720.2.1
Uncharacterized protein (248 aa)
     
 
  0.971
LOC543864
Peroxisomal targeting signal type 2 receptor (316 aa)
       
 
  0.951
Solyc06g007700.2.1
Uncharacterized protein (296 aa)
         
  0.902
Solyc03g114330.2.1
Uncharacterized protein (399 aa)
         
 
0.800
LOC543655
Putative uncharacterized protein (235 aa)
       
 
  0.783
Solyc04g080000.1.1
Uncharacterized protein (256 aa)
       
 
  0.783
Solyc03g093180.1.1
Uncharacterized protein (224 aa)
       
 
  0.783
Solyc01g091730.2.1
Uncharacterized protein (105 aa)
       
 
  0.783
Solyc06g066570.2.1
Uncharacterized protein (353 aa)
       
 
  0.688
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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