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STRINGSTRING
Solyc06g071620.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g071620.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g071620.2.1annotation not available (2014 aa)    
Predicted Functional Partners:
101261833
annotation not available (2384 aa)
     
 
  0.987
Solyc06g043160.1.1
annotation not available (52 aa)
     
 
  0.985
Solyc07g007210.2.1
annotation not available (925 aa)
     
 
  0.976
101261183
Uncharacterized protein; Cleavage and polyadenylation specificity factor (CPSF) A subunit protein (1393 aa)
     
 
  0.970
Solyc04g010260.2.1
annotation not available (1175 aa)
     
 
  0.970
Solyc07g054200.2.1
Uncharacterized protein; pre-mRNA splicing factor-related (753 aa)
     
 
  0.969
cdc5
CDC5-like protein (987 aa)
     
 
  0.944
101244224
Uncharacterized protein; P-loop containing nucleoside triphosphate hydrolases superfamily protein (1588 aa)
     
 
  0.943
Solyc04g016510.2.1
annotation not available (488 aa)
     
 
  0.936
101263464
annotation not available (521 aa)
     
 
  0.936
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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