STRINGSTRING
Solyc06g071620.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g071620.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g071620.2.1Uncharacterized protein (2014 aa)    
Predicted Functional Partners:
Solyc01g068480.2.1
Uncharacterized protein (1588 aa)
     
  0.986
Solyc07g008880.2.1
Uncharacterized protein (2384 aa)
     
  0.979
Solyc06g043160.1.1
Uncharacterized protein (52 aa)
     
  0.979
Solyc01g086990.2.1
Uncharacterized protein (916 aa)
     
  0.976
Solyc12g056080.1.1
Uncharacterized protein (693 aa)
     
  0.974
Solyc03g115390.2.1
Uncharacterized protein (909 aa)
     
  0.973
Solyc02g078970.2.1
Uncharacterized protein (570 aa)
     
  0.973
Solyc01g094480.2.1
Uncharacterized protein (482 aa)
     
  0.972
Solyc05g051070.2.1
Uncharacterized protein (310 aa)
     
  0.970
Solyc09g010190.2.1
Peptidyl-prolyl cis-trans isomerase ; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (164 aa)
       
  0.970
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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