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STRINGSTRING
Solyc06g072010.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g072010.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g072010.1.1annotation not available (79 aa)    
Predicted Functional Partners:
101248688
annotation not available (411 aa)
     
 
  0.640
101256736
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins (245 aa)
     
 
  0.638
101248592
Uncharacterized protein; Ubiquitin fusion degradation UFD1 family protein (569 aa)
     
 
  0.527
101248524
annotation not available (317 aa)
     
 
  0.517
101257469
DNA-binding HORMA family protein (208 aa)
     
 
  0.483
101264260
Transducin family protein / WD-40 repeat family protein (757 aa)
     
 
  0.476
Solyc09g091650.2.1
Uncharacterized protein; P-loop containing nucleoside triphosphate hydrolases superfamily protein (999 aa)
     
   
  0.471
Solyc06g074770.2.1
annotation not available (925 aa)
     
 
  0.464
Solyc02g088550.2.1
annotation not available (512 aa)
     
 
  0.464
Solyc08g082050.1.1
annotation not available (355 aa)
     
 
  0.461
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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