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STRINGSTRING
101246149 protein (Solanum lycopersicum) - STRING interaction network
"101246149" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101246149annotation not available (109 aa)    
Predicted Functional Partners:
101268847
Unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink) (417 aa)
     
 
  0.834
Solyc08g069210.1.1
annotation not available (220 aa)
     
 
  0.834
101259654
annotation not available (114 aa)
     
 
  0.834
101252892
annotation not available (114 aa)
     
 
  0.834
Solyc00g074210.1.1
annotation not available (148 aa)
     
 
  0.834
101244620
annotation not available (670 aa)
   
 
  0.748
101267273
annotation not available (681 aa)
   
 
  0.748
HSP70
Heat shock protein 70 (692 aa)
   
 
  0.748
101265681
annotation not available (703 aa)
   
 
  0.748
101248805
Uncharacterized protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- chloroplast; EXPRESSED IN- cultured cell; CONTAINS InterPro DOMAIN/s- Mitochondrial inner membrane translocase complex, subunit Tim21 (InterPro-IPR013261) /.../35333 Blast hits to 34131 proteins in 2444 species- Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source- NCBI BLink) (311 aa)
     
 
  0.711
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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