STRINGSTRING
Solyc06g072330.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g072330.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g072330.2.1Uncharacterized protein (109 aa)    
Predicted Functional Partners:
Solyc12g042340.1.1
Uncharacterized protein (417 aa)
     
  0.929
Solyc08g069210.1.1
Uncharacterized protein (220 aa)
     
  0.929
Solyc08g006120.2.1
Uncharacterized protein (114 aa)
     
  0.929
Solyc06g068820.2.1
Uncharacterized protein (114 aa)
     
  0.929
Solyc00g074210.1.1
Annotation not available (148 aa)
     
  0.929
HSP70
Heat shock protein 70 (692 aa)
   
  0.871
Solyc01g106260.2.1
Uncharacterized protein (670 aa)
   
  0.871
Solyc01g106210.2.1
Uncharacterized protein (681 aa)
   
  0.871
Solyc01g103450.2.1
Uncharacterized protein (703 aa)
   
  0.871
Solyc11g039910.1.1
Uncharacterized protein (233 aa)
     
  0.767
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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