STRINGSTRING
PTS protein (Solanum lycopersicum) - STRING interaction network
"PTS" - PETROSELINUM in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTSPETROSELINUM (171 aa)    
Predicted Functional Partners:
T6
Homeobox protein knotted-1-like LET6 ; May have a role to play in formative events in ovule and embryo morphogenesis. Probably binds to the DNA sequence 5’-TGAC- 3’ (354 aa)
           
  0.697
MAPKKKe
MAPKKKe (1401 aa)
           
  0.693
NAM
Goblet; NO APICAL MERISTEM (352 aa)
           
  0.519
Solyc03g112430.1.1
Uncharacterized protein (196 aa)
           
  0.508
SlERF52
AP2/ERF transcription factor (162 aa)
           
  0.469
TKn3
Knotted 3 protein (320 aa)
           
  0.467
PT2
Inorganic phosphate transporter (528 aa)
           
  0.463
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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