STRINGSTRING
Solyc06g072600.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g072600.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g072600.2.1Uncharacterized protein (78 aa)    
Predicted Functional Partners:
Solyc08g083380.2.1
Uncharacterized protein (88 aa)
     
  0.995
Solyc10g086510.1.1
Uncharacterized protein (93 aa)
     
 
  0.908
Solyc08g048070.1.1
Uncharacterized protein (67 aa)
     
 
  0.902
TIM10
Small zinc finger-like protein (81 aa)
     
 
  0.842
Solyc06g005840.2.1
Uncharacterized protein (62 aa)
     
 
  0.839
Solyc10g081370.1.1
Uncharacterized protein ; Probable common Sm protein, is found in U1 and U2 snRNPs and may be part of the spliceosome (88 aa)
     
        0.832
Solyc12g049220.1.1
Uncharacterized protein (185 aa)
     
  0.756
Solyc10g024350.1.1
Uncharacterized protein (151 aa)
     
  0.756
Solyc03g121860.1.1
Uncharacterized protein (190 aa)
     
  0.756
Solyc04g008770.2.1
Uncharacterized protein (153 aa)
     
  0.745
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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