STRINGSTRING
101263418 protein (Solanum lycopersicum) - STRING interaction network
"101263418" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101263418annotation not available (505 aa)    
Predicted Functional Partners:
101244485
Uncharacterized protein; Chloroplast sensor kinase (612 aa)
     
 
  0.887
101259186
annotation not available (144 aa)
   
 
  0.852
101265334
Protein serine/threonine phosphatases;protein kinases;catalytics;cAMP-dependent protein kinase regulators;ATP binding;protein serine/threonine phosphatases (1080 aa)
     
 
  0.823
101268143
annotation not available (158 aa)
       
 
  0.807
Solyc12g035890.1.1
annotation not available (229 aa)
   
 
  0.750
Solyc08g081560.1.1
Uncharacterized protein; RNA polymerase subunit alpha (112 aa)
   
 
  0.750
Solyc01g017440.1.1
annotation not available (202 aa)
   
 
  0.750
3950450
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (266 aa)
   
 
  0.750
101244750
annotation not available (333 aa)
       
 
  0.718
101256338
annotation not available (333 aa)
       
 
  0.718
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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