STRINGSTRING
Solyc06g072720.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g072720.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g072720.2.1Uncharacterized protein (357 aa)    
Predicted Functional Partners:
Solyc10g080130.1.1
Uncharacterized protein (308 aa)
       
    0.609
Solyc06g075390.2.1
Uncharacterized protein (323 aa)
       
    0.609
Solyc01g095480.2.1
Uncharacterized protein (243 aa)
       
    0.581
Solyc05g056110.2.1
Uncharacterized protein (321 aa)
     
  0.574
Solyc08g066700.2.1
Uncharacterized protein (232 aa)
     
    0.546
Solyc08g007520.2.1
Uncharacterized protein (330 aa)
       
    0.546
Solyc05g047420.2.1
Uncharacterized protein (443 aa)
       
    0.546
Solyc12g089280.1.1
Uncharacterized protein (1116 aa)
       
  0.540
Solyc04g081280.2.1
Uncharacterized protein (1109 aa)
       
  0.540
XRN4
5’-3’ exoribonuclease 4 (978 aa)
       
  0.540
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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