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STRINGSTRING
101268481 protein (Solanum lycopersicum) - STRING interaction network
"101268481" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101268481Uncharacterized protein; Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2 (423 aa)    
Predicted Functional Partners:
Solyc08g080110.2.1
Protein of unknown function (DUF544) (656 aa)
           
  0.775
Solyc12g099030.1.1
Uncharacterized protein; Ubiquitin (190 aa)
     
 
  0.768
101248858
Uncharacterized protein; Ubiquitin (156 aa)
     
 
  0.768
UBI3
Ubiquitin-40S ribosomal protein S27a; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked- Lys-48-linked is involve [...] (156 aa)
     
 
  0.768
Solyc08g083120.2.1
Uncharacterized protein; Ubiquitin (128 aa)
       
      0.744
Solyc08g008590.2.1
annotation not available (136 aa)
       
      0.744
Solyc06g053210.2.1
annotation not available (188 aa)
       
      0.744
101264240
Ubiquitin (128 aa)
       
      0.744
Solyc01g096290.2.1
Ubiquitin (128 aa)
       
      0.744
SlATG4
annotation not available (391 aa)
     
   
  0.727
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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