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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc06g073030.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g073030.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g073030.1.1annotation not available (398 aa)    
Predicted Functional Partners:
Solyc12g005500.1.1
annotation not available (283 aa)
     
 
  0.698
101267849
annotation not available (289 aa)
     
 
  0.698
101246069
Leucine-rich receptor-like protein kinase family protein (1109 aa)
           
  0.605
101244287
Uncharacterized protein; SPFH/Band 7/PHB domain-containing membrane-associated protein family (361 aa)
       
 
  0.577
101267069
annotation not available (141 aa)
     
 
  0.558
101260937
Uncharacterized protein; methionyl-tRNA synthetase / methionine--tRNA ligase / MetRS (cpMetRS); Belongs to the class-I aminoacyl-tRNA synthetase family (619 aa)
         
  0.552
Solyc11g013260.1.1
annotation not available (301 aa)
     
 
  0.531
101261982
annotation not available (279 aa)
     
 
  0.531
Solyc05g051510.2.1
annotation not available (277 aa)
     
 
  0.531
Solyc06g054360.1.1
annotation not available (205 aa)
     
   
  0.526
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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