STRINGSTRING
Solyc06g073120.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g073120.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g073120.2.1Uncharacterized protein (257 aa)    
Predicted Functional Partners:
Solyc10g079430.1.1
Uncharacterized protein (229 aa)
     
 
    0.959
Solyc09g005760.2.1
Uncharacterized protein (893 aa)
     
 
    0.913
Solyc02g069950.2.1
KRR-R motif-containing protein 1 ; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly (382 aa)
     
  0.910
Solyc01g005810.2.1
Uncharacterized protein (302 aa)
     
        0.903
Solyc01g006170.2.1
Uncharacterized protein (288 aa)
     
 
  0.893
Solyc01g006090.2.1
Uncharacterized protein (282 aa)
     
 
  0.893
Solyc09g075030.2.1
Uncharacterized protein (196 aa)
     
        0.890
Solyc06g050820.1.1
Uncharacterized protein (146 aa)
     
      0.889
Solyc02g068420.2.1
Uncharacterized protein (458 aa)
     
      0.889
Solyc10g084740.1.1
Uncharacterized protein (440 aa)
     
 
    0.888
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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