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Solyc06g073780.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g073780.2.1" - Structural maintenance of chromosomes protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g073780.2.1Structural maintenance of chromosomes protein; SMC3 (1229 aa)    
Predicted Functional Partners:
Solyc05g026510.2.1
Sister-chromatid cohesion protein 3 (1155 aa)
     
 
  0.999
100134876
Structural maintenance of chromosomes protein; SMC1 (1218 aa)
   
 
0.996
Solyc03g059420.2.1
Sister chromatid cohesion protein; PHD finger family protein (1620 aa)
     
 
  0.996
Solyc03g059400.1.1
annotation not available (86 aa)
     
 
  0.996
Solyc06g074870.1.1
annotation not available (402 aa)
     
 
  0.994
Solyc06g074860.1.1
annotation not available (171 aa)
     
 
  0.994
Solyc09g037030.1.1
annotation not available (153 aa)
     
 
  0.993
Solyc05g021550.1.1
annotation not available (83 aa)
     
 
  0.993
101252346
Sister chromatid cohesion 1 protein 4 (1278 aa)
     
 
  0.992
Solyc02g086540.1.1
annotation not available (476 aa)
     
 
  0.992
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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