STRINGSTRING
Solyc06g074200.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g074200.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g074200.2.1Uncharacterized protein (145 aa)    
Predicted Functional Partners:
Solyc07g066150.1.1
Uncharacterized protein (146 aa)
     
   
  0.887
Solyc02g069460.2.1
Uncharacterized protein (228 aa)
     
   
  0.832
Solyc02g069450.2.1
Uncharacterized protein (246 aa)
     
   
  0.832
Solyc06g082950.2.1
Uncharacterized protein (220 aa)
     
   
  0.827
Solyc06g082940.2.1
Uncharacterized protein (220 aa)
     
   
  0.827
Solyc08g013670.2.1
Uncharacterized protein (163 aa)
     
   
  0.826
CAB6A
Chlorophyll a-b binding protein 6A, chloroplastic ; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated (246 aa)
     
   
  0.821
Solyc05g056050.2.1
Uncharacterized protein (246 aa)
     
   
  0.821
Solyc12g011280.1.1
Uncharacterized protein (273 aa)
     
   
  0.820
CAB8
Chlorophyll a-b binding protein 8, chloroplastic ; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated (273 aa)
     
   
  0.820
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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