STRINGSTRING
Solyc06g074720.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g074720.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g074720.2.1Uncharacterized protein (219 aa)    
Predicted Functional Partners:
Solyc04g016380.2.1
Uncharacterized protein (312 aa)
     
 
  0.997
Solyc10g083600.1.1
Uncharacterized protein (337 aa)
     
 
  0.997
Solyc09g098360.2.1
Uncharacterized protein (260 aa)
     
 
  0.997
Solyc11g066280.1.1
Uncharacterized protein (335 aa)
     
 
  0.996
Solyc05g005730.2.1
Uncharacterized protein (345 aa)
     
 
  0.996
Solyc01g109990.2.1
Uncharacterized protein (1012 aa)
     
 
  0.996
Solyc01g104470.2.1
Uncharacterized protein (229 aa)
     
 
  0.996
Solyc01g065580.2.1
Uncharacterized protein (620 aa)
     
 
  0.996
Solyc12g006550.1.1
Uncharacterized protein (329 aa)
     
      0.996
Solyc02g069950.2.1
KRR-R motif-containing protein 1 ; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly (382 aa)
     
      0.996
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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