STRINGSTRING
LOC778315 protein (Solanum lycopersicum) - STRING interaction network
"LOC778315" - Similar to aquaporin in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC778315Similar to aquaporin (250 aa)    
Predicted Functional Partners:
Solyc03g083440.2.1
Uncharacterized protein (2226 aa)
     
 
  0.929
Solyc03g063560.2.1
Uncharacterized protein (1621 aa)
     
 
  0.908
Solyc03g117490.2.1
Uncharacterized protein (522 aa)
   
 
  0.859
Solyc05g018300.2.1
Uncharacterized protein (1080 aa)
   
  0.675
Solyc11g008380.1.1
Glycerol-3-phosphate dehydrogenase (406 aa)
   
   
  0.564
Solyc11g008370.1.1
Uncharacterized protein (169 aa)
   
   
  0.564
Solyc12g014080.1.1
Uncharacterized protein (217 aa)
     
  0.516
Solyc12g010790.1.1
Uncharacterized protein (217 aa)
     
  0.516
Solyc11g012460.1.1
Uncharacterized protein (276 aa)
     
  0.516
Solyc11g010100.1.1
Uncharacterized protein (224 aa)
     
  0.516
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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