STRINGSTRING
Solyc06g074860.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g074860.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g074860.1.1Uncharacterized protein (171 aa)    
Predicted Functional Partners:
Solyc05g026510.2.1
Uncharacterized protein (1155 aa)
     
  0.983
Solyc06g073780.2.1
SMC3 (1229 aa)
     
  0.983
Solyc06g083870.2.1
SMC1 (1218 aa)
     
  0.982
Solyc03g059420.2.1
Uncharacterized protein (1620 aa)
     
  0.965
Solyc03g059400.1.1
Uncharacterized protein (86 aa)
     
  0.965
Solyc11g012770.1.1
Uncharacterized protein (1659 aa)
     
  0.955
Solyc06g068430.2.1
Uncharacterized protein (725 aa)
     
  0.955
Solyc06g068060.2.1
Uncharacterized protein (846 aa)
     
  0.955
Solyc06g065710.2.1
Uncharacterized protein (940 aa)
     
  0.955
Solyc06g060380.2.1
Uncharacterized protein (1447 aa)
     
  0.955
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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