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STRINGSTRING
Solyc06g074860.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g074860.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g074860.1.1annotation not available (171 aa)    
Predicted Functional Partners:
Solyc06g073780.2.1
Structural maintenance of chromosomes protein; SMC3 (1229 aa)
     
 
  0.994
100134876
Structural maintenance of chromosomes protein; SMC1 (1218 aa)
     
 
  0.990
Solyc05g026510.2.1
Sister-chromatid cohesion protein 3 (1155 aa)
     
 
  0.974
101255831
Uncharacterized protein; Structural maintenance of chromosomes 5 (1050 aa)
     
 
  0.950
Solyc09g037030.1.1
annotation not available (153 aa)
     
 
  0.943
Solyc05g021550.1.1
annotation not available (83 aa)
     
 
  0.943
Solyc03g093260.2.1
annotation not available (552 aa)
     
 
  0.912
Solyc03g093250.1.1
annotation not available (647 aa)
     
 
  0.912
101244926
Structural maintenance of chromosome 3 (1246 aa)
     
 
  0.888
101055576
DNA polymerase alpha catalytic subunit (1561 aa)
     
 
  0.886
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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