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STRINGSTRING
101267613 protein (Solanum lycopersicum) - STRING interaction network
"101267613" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101267613annotation not available (220 aa)    
Predicted Functional Partners:
101249229
Uncharacterized protein; Cyclophilin 38 (451 aa)
     
        0.869
101259513
Chloroplast thylakoid lumen protein (210 aa)
     
        0.867
101254767
Uncharacterized protein; NDH dependent flow 6 (173 aa)
     
        0.866
101260607
Uncharacterized protein; Chloroplastic lipocalin (333 aa)
     
        0.864
101266364
Uncharacterized protein; NAD(P)H dehydrogenase 18 (216 aa)
     
        0.864
Solyc02g068270.2.1
Unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- chloroplast thylakoid membrane, chloroplast; EXPRESSED IN- 22 plant structures; EXPRESSED DURING- 13 growth stages; Has 42 Blast hits to /.../teins in 19 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 2 (source- NCBI BLink) (215 aa)
     
        0.856
LOC544217
MRNA binding protein (407 aa)
     
        0.850
101261139
Chloroplast 30S ribosomal protein S20, putative (184 aa)
     
        0.846
Solyc06g019200.2.1
Uncharacterized protein; Ethylene-dependent gravitropism-deficient and yellow-green-like 2 (468 aa)
     
        0.824
101246952
Unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- chloroplast thylakoid membrane, chloroplast stroma, chloroplast; EXPRESSED IN- 19 plant structures; EXPRESSED DURING- 13 growth stages; H /.../Blast hits to 49 proteins in 17 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (190 aa)
     
        0.801
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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