STRINGSTRING
Solyc06g074890.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g074890.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g074890.1.1Uncharacterized protein (220 aa)    
Predicted Functional Partners:
Solyc10g005470.2.1
Uncharacterized protein (139 aa)
   
        0.478
Solyc00g021660.1.1
Annotation not available (74 aa)
   
          0.475
Solyc12g049280.1.1
Uncharacterized protein (296 aa)
   
        0.472
Solyc03g098110.2.1
Uncharacterized protein (385 aa)
   
          0.454
Solyc06g036030.1.1
Uncharacterized protein (132 aa)
   
          0.450
Solyc10g061980.1.1
Uncharacterized protein (148 aa)
   
          0.441
Solyc05g006440.2.1
Uncharacterized protein (197 aa)
   
        0.426
Solyc02g072460.1.1
Uncharacterized protein (154 aa)
   
        0.423
Solyc06g066620.2.1
Uncharacterized protein (147 aa)
   
        0.423
Solyc01g098640.2.1
Uncharacterized protein (289 aa)
   
        0.420
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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