STRINGSTRING
Solyc06g075310.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g075310.2.1" - annotation not available in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g075310.2.1annotation not available (133 aa)    
Predicted Functional Partners:
101256436
annotation not available (150 aa)
     
 
  0.907
101247549
annotation not available (150 aa)
     
 
  0.907
101245320
annotation not available (150 aa)
     
 
  0.907
Solyc01g096760.2.1
Pre-rRNA-processing protein TSR2, conserved region (170 aa)
     
 
  0.877
101268074
Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (155 aa)
     
        0.873
101250451
60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly (187 aa)
     
   
  0.868
Solyc04g074150.1.1
annotation not available (115 aa)
     
        0.866
101254982
Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription (138 aa)
     
      0.859
101259142
annotation not available (312 aa)
     
        0.859
Solyc10g045400.1.1
Uncharacterized protein; Histone acetyltransferase of the GNAT family 1 (404 aa)
     
      0.858
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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