STRINGSTRING
Solyc06g075340.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g075340.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g075340.2.1Uncharacterized protein (1195 aa)    
Predicted Functional Partners:
Solyc03g115630.2.1
Uncharacterized protein (426 aa)
  0.999
Solyc11g006350.1.1
Aspartate carbamoyltransferase (377 aa)
  0.999
ASS
Argininosuccinate synthase (494 aa)
 
  0.997
Solyc11g068830.1.1
Uncharacterized protein (477 aa)
   
  0.995
Solyc12g089210.1.1
Uncharacterized protein (379 aa)
   
  0.991
OTC
Ornithine carbamoyltransferase (374 aa)
   
  0.991
Solyc02g076720.2.1
Uncharacterized protein (1459 aa)
   
   
  0.987
Solyc01g107270.2.1
Uncharacterized protein (1333 aa)
   
   
  0.987
GFPT2
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2 (677 aa)
     
  0.980
Solyc11g064920.1.1
Uncharacterized protein (534 aa)
   
  0.972
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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