STRINGSTRING
Solyc06g076400.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g076400.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g076400.2.1Uncharacterized protein (410 aa)    
Predicted Functional Partners:
Solyc08g077780.2.1
Uncharacterized protein (339 aa)
   
  0.965
Solyc01g108280.2.1
Uncharacterized protein (362 aa)
   
  0.965
Solyc12g095970.1.1
Uncharacterized protein (190 aa)
       
 
  0.908
Solyc09g015380.1.1
Uncharacterized protein (201 aa)
       
 
  0.908
Solyc04g006930.2.1
Uncharacterized protein (800 aa)
   
  0.885
Solyc12g098100.1.1
Uncharacterized protein (1097 aa)
   
  0.862
Solyc12g008500.1.1
Uncharacterized protein (1008 aa)
   
  0.862
Solyc12g008400.1.1
Uncharacterized protein (1204 aa)
   
  0.862
Solyc10g085120.1.1
Uncharacterized protein (1013 aa)
   
  0.862
Solyc10g079170.1.1
Uncharacterized protein (888 aa)
   
  0.862
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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