• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
101258269 protein (Solanum lycopersicum) - STRING interaction network
"101258269" - 60S acidic ribosomal protein P0 in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
10125826960S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10 (318 aa)    
Predicted Functional Partners:
RPL3
Ribosomal protein L3 ; Belongs to the universal ribosomal protein uL3 family (389 aa)
 
 
  0.993
Solyc01g103510.2.1
R-protein L3 B; Belongs to the universal ribosomal protein uL3 family (443 aa)
 
 
  0.993
DDTFR19
60S ribosomal protein L29; Ripening regulated protein DDTFR19 ; Belongs to the eukaryotic ribosomal protein eL29 family (60 aa)
     
 
  0.993
101244604
annotation not available (238 aa)
 
 
  0.993
Solyc08g061850.2.1
annotation not available (250 aa)
 
 
  0.993
101257282
annotation not available (239 aa)
 
 
  0.992
Solyc08g062920.2.1
Uncharacterized protein; Elongation factor 2 (828 aa)
 
 
  0.992
Solyc08g062910.2.1
Uncharacterized protein; Elongation factor 2 (770 aa)
 
 
  0.992
101250574
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits (298 aa)
   
 
  0.992
101256436
annotation not available (150 aa)
 
 
  0.992
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (9%) [HD]