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Solyc06g082160.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g082160.2.1" - SAGA-associated factor 11 in Solanum lycopersicum
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g082160.2.1SAGA-associated factor 11 (336 aa)    
Predicted Functional Partners:
Solyc06g065700.2.1
Uncharacterized protein (685 aa)
       
  0.979
Solyc10g045400.1.1
Uncharacterized protein (404 aa)
       
  0.974
Solyc08g068810.2.1
Uncharacterized protein (549 aa)
       
  0.970
Solyc08g061830.1.1
Uncharacterized protein (179 aa)
       
  0.970
Solyc07g007640.1.1
Uncharacterized protein (237 aa)
       
  0.970
SUS1
Transcription and mRNA export factor SUS1 ; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] (71 aa)
     
  0.965
TRRAP
Transformation/transcription domain-associated protein (3913 aa)
       
  0.960
Solyc09g009680.2.1
Uncharacterized protein (566 aa)
       
  0.958
Solyc03g122020.2.1
Uncharacterized protein (642 aa)
       
  0.958
Solyc02g093490.2.1
Uncharacterized protein (268 aa)
       
  0.957
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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