STRINGSTRING
Solyc06g082200.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g082200.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g082200.2.1Uncharacterized protein (942 aa)    
Predicted Functional Partners:
Solyc07g062450.2.1
Uncharacterized protein (455 aa)
     
  0.763
Solyc09g008460.2.1
Uncharacterized protein (216 aa)
     
 
  0.534
Solyc11g008020.1.1
Uncharacterized protein (216 aa)
     
 
  0.527
Solyc10g086310.1.1
Uncharacterized protein (209 aa)
     
 
  0.527
Solyc04g064510.2.1
Uncharacterized protein (209 aa)
     
 
  0.527
Solyc07g064740.2.1
Uncharacterized protein (673 aa)
         
 
0.516
Solyc05g051570.2.1
Uncharacterized protein (207 aa)
     
 
    0.511
Solyc03g078570.2.1
Uncharacterized protein (207 aa)
     
 
    0.511
Solyc01g088560.2.1
Uncharacterized protein (208 aa)
     
 
    0.511
Solyc02g067670.2.1
Uncharacterized protein (1539 aa)
     
   
  0.435
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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