STRINGSTRING
Solyc06g082370.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g082370.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g082370.2.1Uncharacterized protein (452 aa)    
Predicted Functional Partners:
Solyc11g021130.1.1
Ribosomal protein S7 (285 aa)
     
  0.995
Solyc04g049260.1.1
Uncharacterized protein (166 aa)
     
  0.995
Solyc11g008710.1.1
Uncharacterized protein (502 aa)
     
    0.990
rps16
30S ribosomal protein S16 (132 aa)
     
  0.988
Solyc08g006840.2.1
Uncharacterized protein (327 aa)
     
  0.987
Solyc03g119170.2.1
Uncharacterized protein (436 aa)
     
  0.986
Solyc10g080160.1.1
Uncharacterized protein (385 aa)
     
    0.982
Solyc04g079790.2.1
Uncharacterized protein (237 aa)
     
    0.982
Solyc10g084700.1.1
Uncharacterized protein (267 aa)
     
  0.966
Solyc01g058530.2.1
Uncharacterized protein (120 aa)
     
  0.966
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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