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STRINGSTRING
Solyc06g082450.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g082450.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g082450.1.1annotation not available (188 aa)    
Predicted Functional Partners:
101262405
Ovate family protein 14 (275 aa)
           
  0.775
104646050
Ovate family protein 5 (377 aa)
           
  0.741
101249302
Ovate family protein 11 (211 aa)
           
  0.691
101249993
annotation not available (391 aa)
           
  0.691
LOC543847
Ovate protein (278 aa)
           
  0.691
101247035
annotation not available (351 aa)
     
   
  0.688
101265492
annotation not available (321 aa)
           
  0.620
Solyc09g018200.1.1
annotation not available (251 aa)
           
  0.620
109118919
annotation not available (137 aa)
           
  0.574
104644432
annotation not available (178 aa)
           
  0.574
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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