STRINGSTRING
Solyc06g082980.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g082980.2.1" - COSII_At1g20050 in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g082980.2.1COSII_At1g20050 (221 aa)    
Predicted Functional Partners:
FK
Delta14-sterol reductase (369 aa)
     
 
  0.952
Solyc01g087560.2.1
Methyltransferase (346 aa)
         
  0.947
Solyc02g086190.1.1
Uncharacterized protein (257 aa)
     
 
  0.934
Solyc02g086180.2.1
Uncharacterized protein (271 aa)
     
 
  0.934
Solyc02g063240.2.1
Uncharacterized protein (271 aa)
     
 
  0.934
Solyc02g069490.2.1
Delta(24)-sterol reductase-like (579 aa)
     
 
  0.930
DWF1
DWARF1/DIMINUTO (568 aa)
     
 
  0.930
Solyc10g055680.1.1
Methyltransferase (357 aa)
         
  0.929
Solyc01g111830.2.1
Methyltransferase (358 aa)
         
  0.929
Solyc05g008680.1.1
Methyltransferase (363 aa)
         
  0.928
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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