STRINGSTRING
Solyc06g083080.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g083080.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g083080.2.1Uncharacterized protein (151 aa)    
Predicted Functional Partners:
Solyc12g099780.1.1
Uncharacterized protein (384 aa)
           
  0.516
Solyc04g051820.2.1
Uncharacterized protein (98 aa)
           
  0.516
Solyc07g045340.2.1
Uncharacterized protein (77 aa)
           
  0.491
Solyc04g011910.2.1
Uncharacterized protein (96 aa)
           
  0.476
Solyc07g065640.2.1
Uncharacterized protein (77 aa)
           
  0.454
Solyc05g051710.2.1
Uncharacterized protein (103 aa)
           
  0.429
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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