STRINGSTRING
Solyc06g083090.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g083090.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g083090.2.1Uncharacterized protein (615 aa)    
Predicted Functional Partners:
Solyc10g079740.1.1
Uncharacterized protein (305 aa)
     
  0.908
Solyc12g005050.1.1
Uncharacterized protein (427 aa)
     
  0.890
Solyc09g075190.2.1
Gamma-tubulin complex component ; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome (749 aa)
     
 
  0.729
Solyc03g079920.2.1
Uncharacterized protein (787 aa)
     
 
  0.576
Solyc08g013990.2.1
Uncharacterized protein (289 aa)
           
  0.544
Solyc03g111380.2.1
Tubulin gamma chain ; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome (474 aa)
     
 
  0.542
Solyc02g081460.2.1
Gamma-tubulin complex component ; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome (707 aa)
     
 
    0.535
NMP1
Nuclear matrix protein 1 (331 aa)
           
  0.530
Solyc02g070260.2.1
Uncharacterized protein (1738 aa)
     
 
    0.516
Solyc03g046590.2.1
Uncharacterized protein (801 aa)
           
  0.516
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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