STRINGSTRING
Solyc06g083300.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g083300.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g083300.2.1Uncharacterized protein (476 aa)    
Predicted Functional Partners:
Solyc01g068240.2.1
Uncharacterized protein (533 aa)
     
 
  0.955
Solyc11g065210.1.1
Uncharacterized protein (534 aa)
     
 
  0.953
Solyc07g039550.2.1
Uncharacterized protein (1190 aa)
     
 
  0.908
Solyc01g110990.2.1
Uncharacterized protein (1111 aa)
     
 
  0.908
Solyc09g008120.2.1
Uncharacterized protein (711 aa)
     
 
  0.611
Solyc09g097820.2.1
Uncharacterized protein (693 aa)
     
 
  0.607
Solyc11g010310.1.1
Uncharacterized protein (1705 aa)
       
 
  0.602
Solyc05g015040.2.1
Uncharacterized protein (700 aa)
       
 
  0.602
Solyc04g014210.2.1
Uncharacterized protein (1730 aa)
       
 
  0.602
Solyc08g075360.1.1
Uncharacterized protein (606 aa)
     
      0.601
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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