STRINGSTRING
Solyc06g083390.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc06g083390.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc06g083390.2.1Uncharacterized protein (250 aa)    
Predicted Functional Partners:
Solyc12g016220.1.1
Nucleotide binding site-leucine rich repeat protein (1021 aa)
       
    0.808
Solyc11g010160.1.1
Uncharacterized protein (907 aa)
       
    0.808
Solyc11g007790.1.1
Uncharacterized protein (839 aa)
       
    0.808
Solyc10g076440.1.1
Nucleotide binding site-leucine rich repeat protein (1005 aa)
       
    0.808
Solyc08g013970.1.1
Uncharacterized protein (805 aa)
       
    0.808
Solyc08g007250.1.1
Uncharacterized protein (968 aa)
       
    0.808
Solyc08g005440.2.1
Uncharacterized protein (931 aa)
       
    0.808
Solyc06g048910.1.1
Uncharacterized protein (1019 aa)
       
    0.808
Solyc03g005660.2.1
Uncharacterized protein (866 aa)
       
    0.808
Solyc02g037540.1.1
Uncharacterized protein (1024 aa)
       
    0.808
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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